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    Spaghetti Squash Casserole

    Low Carb Dairy-Free Recipes Gluten Free Main Courses February 20, 2023 | By Kristen Chidsey | 14 Comments | *This post may contain affiliate links. Read my disclosure policy.

    Jump to Recipe
    This Spaghetti Squash Casserole made with spaghetti squash, sausage, and marinara sauce, is not only a gluten-free, low carb, and Paleo casserole, it is a satisfying, delicious, hearty yet healthy recipe that you entire family will enjoy--even if they aren't on any special diet. 

    Made with spaghetti squash, Italian sausage, and spaghetti sauce, this Spaghetti Squash Casserole is a satisfying, low-carb recipe that your entire family will enjoy--even if they aren't on a low-carb diet. 

    Easy Spaghetti Squash Casserole being dished out of casserole pan.


    I have always loved spaghetti squash. As a child, I remember eating it as a side dish slathered in butter and salt, and pepper.

    Recently, I have been using spaghetti squash as more of the star of the show! It t is an easy vegetable to use in place of carbs, like noodles. But even if you aren't low-carb, using spaghetti squash in place of noodles is a great incorporate more veggies into your diet.

    When paired with spicy Italian Sausage, and flavorful marinara sauce, spaghetti squash becomes the base for a delicious, flavorful casserole--that happens to be gluten-free, low-carb, dairy-free, and Paleo-friendly as well.

    And while this spaghetti squash casserole is a great dish to accommodate so many special diets, bottom line is that this simple casserole is comforting, hearty, and full of incredible flavor. Not to mention EASY! This casserole is made with only 5 key ingredients!

    Notes/Modification on Ingredients

    • Sausage: Use ground store-bought or homemade Italian sausage. Pork, chicken, or turkey all work well in this casserole. Just be sure to read the ingredients in your sausage as some brands have added gluten or sugar--which is a no-no for many people following a low-carb or paleo lifestyle. And gluten is certainly a no-no for anyone that is gluten-free!
    • Garlic and Onion: Aren't most recipes improved with the addition of garlic and onions?! Glad you agree!
    • Oregano: I keep this super simple and just add in dried oregano. The spaghetti sauce is already flavored, so just a bit of dried oregano really makes this dish pop.
    • Spaghetti sauce: Use homemade spaghetti sauce, Instant Pot Spaghetti Sauce, or your favorite jarred sauce. Be sure to omit sugar from the homemade sauce or use no added sugar sauce to keep this Paleo Friendly.
    • Eggs: Eggs will help to bind this casserole together and add an additional dose of protein.
    • Spaghetti squash: Of course, we need spaghetti squash, as it is the star of this casserole. Select a large spaghetti squash that is free from bruises and blemishes and feels slightly heavier than it looks.
    • Cheese: Cheese is COMPLETELY optional, but if you are not dairy-free or following a paleo diet, I strongly suggest adding a layer of Mozzarella and Parmesan cheese to the top of this casserole.

    How to make Spaghetti Squash Casserole

    Step One: Prepare Spaghetti Squash

    I prefer preparing Instant Pot Spaghetti Squash as the base for this casserole. But if you don't have an Instant Pot, follow the following steps to roast your squash.

    • Start by cutting the squash in half and scooping out the seeds.
    • Place squash face down on a baking sheet.
    • Roast the squash for 35 minutes at 400 degrees.
    • Once squash is finished cooking and cools enough to handle, scoop out strands of squash and place them in a large bowl.

    Step Two: Prepare Casserole

    • While the squash is cooking, brown the sausage and onions together until the sausage is cooked through.
    • Add in garlic and oregano and cook for 1-2 minutes longer.
    • Drain off any excess grease.
    • Add meat mixture to spaghetti squash.
    • Add in whisked eggs, and 2 cups of tomato sauce, and season with salt and pepper, Mix well.
    Spaghetti Squash Casserole Mixture in glass bowl
    • Transfer the mixture to a greased 8x8 dish.
    • Top with an additional cup of spaghetti sauce.
    • Bake for 1 hour or until the top is bubbly and browned.
    • Serve!
    Paleo Spaghetti Squash Casserole in green baking dish

    More Allergy-Friendly Dinner Recipes

    • Paleo Veggie Burgers
    • Crock Pot Pork and Sauerkraut
    • Skillet Pork Tenderloin
    • Gluten-Free Eggplant Parmesan
    Spaghetti Squash Casserole

    Spaghetti Squash Casserole

    A delicious, hearty Italian casserole made with Spaghetti Squash that is gluten-free, dairy-free, low carb, and Paleo friendly.
    5 from 7 votes
    Print Pin Rate
    Course: Main Course
    Cuisine: Italian
    Prep Time: 15 minutes minutes
    Cook Time: 1 hour hour 35 minutes minutes
    Total Time: 1 hour hour 50 minutes minutes
    Servings: 6
    Calories: 231kcal
    Author: Kristen Chidsey

    Ingredients

    • 1 large spaghetti squash
    • 1 tablespoon olive oil
    • 1 pound Italian sausage
    • 3 eggs
    • 3 cups spaghetti sauce
    • 1 teaspoon dried oregano
    • 1 onion minced
    • 3 cloves garlic minced
    Prevents your screen from going dark while preparing the recipe.

    Instructions

    Prepare Spaghetti Squash

    • Preheat oven to 400 degrees. 
    • Cut the squash in half and scoop out the seeds. Place cut side down on a baking sheet that has been lightly greased with olive oil and roast for 35 minutes. After squash is baked, reduce oven heat to 350 degrees. 
    • Once cool enough to handle, remove strands of spaghetti squash and place in large bowl. 

    Prepare Casserole

    • While the squash is roasting, brown the sausage and onions together in 1 tablespoon olive oil, until the sausage is cooked through. Add in the garlic and oregano and saute for 1-2 minutes longer.  Remove from heat and drain off excess grease.  
    • Add sausage mixture, whisked eggs, and 2 cups of the sauce to the spaghetti squash and mix well. 
    • Transfer mixture to an 8x8 dish and cover with remaining 1 cup of sauce. If using cheese, sprinkle evenly over the casserole at this time.
    • Bake for 1 hour at 350 degrees or until top is bubbly and browned. 

    Equipment Needed

    • 8x8 baking pan

    Notes

    • Sausage: Use ground Italian sausage. Pork, chicken, or turkey all work well in this casserole. Just be sure to read the ingredients in your sausage as some brands have added gluten or sugar.
    • Spaghetti sauce--Be sure to omit sugar from homemade sauce or use no added sugar sauce to keep this Paleo Friendly.
    • Spaghetti squash: In place of roasting the squash, use my method for cooking spaghetti squash in the Instant Pot, by cutting in half, removing the seed, and cooking on high pressure for 7 minutes. Be sure to place your squash on a trivet over 1.5 cups of cold water. 
    • Cheese: If you are not dairy-free or following a paleo diet, I suggest adding 1 cup of shredded Mozzarella and ¼ cup Parmesan cheese to the top of this casserole. 

    Nutrition

    Calories: 231kcal | Carbohydrates: 12g | Protein: 16g | Fat: 13g | Saturated Fat: 3g | Cholesterol: 121mg | Sodium: 1375mg | Potassium: 617mg | Fiber: 2g | Sugar: 8g | Vitamin A: 760IU | Vitamin C: 33.4mg | Calcium: 51mg | Iron: 8.9mg
    Liked this Recipe? Tag me Today!Snap a picture and tag #amindfullmom on Instagram - I would love to see!
    « Instant Pot Honey Baked Ham
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    About Kristen Chidsey

    Hi, I am Kristen, creator of A Mind "Full" Mom. I believe that making a wholesome family meal does not need to be hard or expensive! I love nothing more than to share with you delicious solutions for your hungry family.

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    1. Allison Wolf

      October 13, 2021 at 6:03 pm

      5 stars
      This was fantastic! The whole family loved it. I made the recipe as written but I added about 6 oz of thawed frozen spinach (after I squeezed the water out). Great recipe!

      Reply
    2. Dawn

      July 22, 2021 at 3:01 pm

      Hi Kristen, I’m really excited to try this! Quick question, are the leftovers good or do they get too soggy? My husband isn’t a huge squash fan so this will be something I’ll have to make just for me!

      Reply
      • Kristen Chidsey

        July 22, 2021 at 3:09 pm

        I love the leftovers myself and have not had an issue with sogginess. However, you can broil a single serving on a baking tray to really crisp it up.

        Reply
    3. Taylor

      January 29, 2019 at 9:27 pm

      5 stars
      This might be a silly question but are you really supposed to cook it for 1 hour at 30 degrees or is that supposed to be 350 (as it stated in the first step 2 "reduce heat to 350"? Excited to try this for dinner. Thank you

      Reply
      • Kristen Chidsey

        January 30, 2019 at 6:28 am

        Hi Taylor! Not a silly question at all--that was an error. I have corrected it to say 350 degrees 🙂 Enjoy!

        Reply
        • Allison

          May 02, 2021 at 12:34 pm

          Could you either leave it the egg or use an egg substitute? This looks delicious!

          Reply
          • Kristen Chidsey

            May 02, 2021 at 1:04 pm

            Hi Allison! I would suggest leaving the egg out, as an egg substitute may give this an odd texture. It won't hold together as well, but still delicious!

            Reply
    4. pepperpie

      January 17, 2019 at 6:01 am

      5 stars
      I made this as written except for microwaving the spaghetti squash the day before just to save time (I have a baby who takes up all our weeknight time!). I'm not sure I would recommend this over roasting because the casserole was very liquidy! Did you find that at all? It was still delicious and even my husband who says he hates spaghetti squash, said this was okay (trust me, that's a compliment). I did top with dairy-free cheese. Because of the liquid it was more like a stew I would say but still very tasty! Thanks!

      Reply
      • Kristen Chidsey

        January 17, 2019 at 6:29 am

        I love how you multi-tasked and made the spaghetti squash before! My squash is typically not that watery, so that may have been part of the issue. It may also have been your tomato sauce was thinner. In the future, drain off excess liquid from your squash and then add only enough tomato sauce to coat. Hope that helps! And glad you and your husband (sort of 😉) enjoyed!

        Reply
    5. Jillian

      January 05, 2019 at 12:25 am

      5 stars
      I'm trying to eat healthier in the new year, and this DELICIOUS spaghetti squash casserole fit in perfectly with my new goal. My entire family LOVED it, I will definitely make it again!

      Reply
      • Kristen Chidsey

        January 05, 2019 at 8:26 am

        That makes me so happy to hear Jillian!

        Reply
    6. Nellie Tracy

      January 04, 2019 at 10:31 pm

      5 stars
      I love having a recipe using spaghetti squash that isn't spaghetti! Definitely a keeper!

      Reply
    7. Sara

      January 04, 2019 at 10:07 pm

      5 stars
      This looks like an awesome weeknight meal, I know my family would love this. I love spaghetti squash - it's so versatile!

      Reply
      • Kristen Chidsey

        January 05, 2019 at 8:32 am

        Spaghetti Squash really is so amazing Sara! Enjoy!

        Reply

    Primary Sidebar

    This Spaghetti Squash Casserole made with spaghetti squash, sausage, and marinara sauce, is not only a gluten-free, low carb, and Paleo casserole, it is a satisfying, delicious, hearty yet healthy recipe that you entire family will enjoy--even if they aren't on any special diet. 

    Meet Kristen

    Kristen Chidsey with apron on in front of vegetables in kitchen.

    Hi! I'm Kristen. It is my honor and passion to share easy, wholesome recipes with you to in turn share your loved ones. These tried and true recipes will help you make delicious, family-friendly meals without stress! Read more

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    This Spaghetti Squash Casserole made with spaghetti squash, sausage, and marinara sauce, is not only a gluten-free, low carb, and Paleo casserole, it is a satisfying, delicious, hearty yet healthy recipe that you entire family will enjoy--even if they aren't on any special diet. 

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